SortCounting_JobFunctor< BV > Class Template Reference

Functor to process job batch (task) More...

Public Types
typedef BV	bvector_type
typedef bvector_type::size_type	size_type

Public Member Functions
	SortCounting_JobFunctor (const vector_char_type &seq_vect, unsigned k_size, size_type from, size_type to, rsc_sparse_vector_u32 &kmer_counts)
	constructor More...
	SortCounting_JobFunctor (const SortCounting_JobFunctor &func)
void	operator() ()
	Main logic (functor) More...

Detailed Description

template<typename BV>
class SortCounting_JobFunctor< BV >

Functor to process job batch (task)

Examples

xsample07.cpp.

Definition at line 478 of file xsample07.cpp.

Constructor & Destructor Documentation

SortCounting_JobFunctor()

template<typename BV >

SortCounting_JobFunctor< BV >::SortCounting_JobFunctor ( const vector_char_type &  seq_vect, unsigned  k_size, size_type  from, size_type  to, rsc_sparse_vector_u32 &  kmer_counts  )

inline

constructor

Examples

xsample07.cpp.

Definition at line 486 of file xsample07.cpp.

Member Function Documentation

operator()()

template<typename BV >

void SortCounting_JobFunctor< BV >::operator() ( void  )

inline

Main logic (functor)

Examples

xsample07.cpp.

Definition at line 502 of file xsample07.cpp.

References get_DNA_code(), get_kmer_code(), bm::rsc_sparse_vector< Val, SV >::get_null_bvector(), bm::rsc_sparse_vector< Val, SV >::merge_not_null(), sort_count(), and bm::rsc_sparse_vector< Val, SV >::sync().

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The documentation for this class was generated from the following file:

• xsample07.cpp